From 2f6666a988e4c1a65b26311d84850cdd26c72f6e Mon Sep 17 00:00:00 2001
From: ebanks <ebanks@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Thu, 11 Nov 2010 22:46:58 +0000
Subject: [PATCH] Correcting traversal statistics

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4652 348d0f76-0448-11de-a6fe-93d51630548a
---
 .../playground/gatk/walkers/genotyper/UnifiedGenotyperV2.java   | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/java/src/org/broadinstitute/sting/playground/gatk/walkers/genotyper/UnifiedGenotyperV2.java b/java/src/org/broadinstitute/sting/playground/gatk/walkers/genotyper/UnifiedGenotyperV2.java
index 833ed1423..7d6e73e9d 100755
--- a/java/src/org/broadinstitute/sting/playground/gatk/walkers/genotyper/UnifiedGenotyperV2.java
+++ b/java/src/org/broadinstitute/sting/playground/gatk/walkers/genotyper/UnifiedGenotyperV2.java
@@ -107,7 +107,7 @@ public class UnifiedGenotyperV2 extends LocusWalker<VariantCallContext, UnifiedG
 
         double percentCallableOfAll()    { return (100.0 * nBasesCallable) / (nBasesVisited-nExtendedEvents); }
         double percentCalledOfAll()      { return (100.0 * nBasesCalledConfidently) / (nBasesVisited-nExtendedEvents); }
-        double percentCalledOfCallable() { return (100.0 * nBasesCalledConfidently) / (nBasesVisited-nExtendedEvents); }
+        double percentCalledOfCallable() { return (100.0 * nBasesCalledConfidently) / (nBasesCallable); }
     }
 
     /**