From 2f21b6ecfb4a3bf29d5f5f3cff73d40b86cb59a3 Mon Sep 17 00:00:00 2001
From: Eric Banks <ebanks@broadinstitute.org>
Date: Wed, 26 Oct 2011 15:50:20 -0400
Subject: [PATCH] Removed debugging output

---
 .../org/broadinstitute/sting/gatk/GenomeAnalysisEngine.java   | 4 ----
 1 file changed, 4 deletions(-)

diff --git a/public/java/src/org/broadinstitute/sting/gatk/GenomeAnalysisEngine.java b/public/java/src/org/broadinstitute/sting/gatk/GenomeAnalysisEngine.java
index 20efc3173..b9d1a55c7 100755
--- a/public/java/src/org/broadinstitute/sting/gatk/GenomeAnalysisEngine.java
+++ b/public/java/src/org/broadinstitute/sting/gatk/GenomeAnalysisEngine.java
@@ -600,10 +600,6 @@ public class GenomeAnalysisEngine {
             logger.info(String.format("Excluding %d loci from original intervals (%.2f%% reduction)",
                     toPruneSize - intervalSize, (toPruneSize - intervalSize) / (0.01 * toPruneSize)));
         }
-
-        // DEBUGGING OUTPUT
-        for ( GenomeLoc loc : intervals )
-            logger.info("Including -L interval: " + loc);
     }
 
     /**