From 2ea85fb62b61a3f039151e3e455b3a69eb612201 Mon Sep 17 00:00:00 2001
From: hanna <hanna@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Thu, 12 Nov 2009 02:12:26 +0000
Subject: [PATCH] Fix some problematic command-line argument naming and
 descriptions.

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2023 348d0f76-0448-11de-a6fe-93d51630548a
---
 .../org/broadinstitute/sting/gatk/GATKArgumentCollection.java   | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/java/src/org/broadinstitute/sting/gatk/GATKArgumentCollection.java b/java/src/org/broadinstitute/sting/gatk/GATKArgumentCollection.java
index dfa23f830..945a0a69a 100755
--- a/java/src/org/broadinstitute/sting/gatk/GATKArgumentCollection.java
+++ b/java/src/org/broadinstitute/sting/gatk/GATKArgumentCollection.java
@@ -57,7 +57,7 @@ public class GATKArgumentCollection {
     public List<File> samFiles = new ArrayList<File>();
 
     @ElementList(required = false)
-    @Argument(fullName = "read_filters", shortName = "rf", doc = "Specify filtration criteria on the each read.", required=false)
+    @Argument(fullName = "read_filter", shortName = "rf", doc = "Specify filtration criteria to apply to each read individually.", required=false)
     public List<String> readFilters = new ArrayList<String>();
 
     @ElementList(required = false)