diff --git a/java/src/org/broadinstitute/sting/gatk/walkers/genotyper/MultiallelicGenotypeLikelihoods.java b/java/src/org/broadinstitute/sting/gatk/walkers/genotyper/MultiallelicGenotypeLikelihoods.java new file mode 100755 index 000000000..00ef179cd --- /dev/null +++ b/java/src/org/broadinstitute/sting/gatk/walkers/genotyper/MultiallelicGenotypeLikelihoods.java @@ -0,0 +1,45 @@ +package org.broadinstitute.sting.gatk.walkers.genotyper; + +import org.broad.tribble.util.variantcontext.Allele; + +import java.util.ArrayList; + +/** + * Created by IntelliJ IDEA. + * User: delangel + * Date: 6/1/11 + * Time: 10:38 AM + * To change this template use File | Settings | File Templates. + */ +public class MultiallelicGenotypeLikelihoods { + private String sample; + private double[] GLs; + private ArrayList alleleList; + private int depth; + + public MultiallelicGenotypeLikelihoods(String sample, + ArrayList A, + double[] log10AALikelihoods, int depth) { + this.sample = sample; + this.alleleList = A; + this.GLs = log10AALikelihoods; + this.depth = depth; + } + + public String getSample() { + return sample; + } + + public double[] getLikelihoods() { + return GLs; + } + + public ArrayList getAlleles() { + return alleleList; + } + + public int getDepth() { + return depth; + } + +}