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fix length calculation (it was including +/- char when it shouldn't) 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1410 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
ebanks 2009-08-11 20:28:24 +00:00
parent 5fab934f4e
commit 2c3f56cb8d
1 changed files with 1 additions and 1 deletions
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2
java/src/org/broadinstitute/sting/gatk/refdata/SimpleIndelROD.java
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@ -22,7 +22,7 @@ public class SimpleIndelROD extends TabularROD implements Genotype, AllelicVaria
return Arrays.asList(this.get("4")); return Arrays.asList(this.get("4"));
String str = this.get("3"); String str = this.get("3");
return Arrays.asList(str.substring(0, str.indexOf(":"))); return Arrays.asList(str.substring(1, str.indexOf(":")));
} }
public String getFWDRefBases() { return ""; } public String getFWDRefBases() { return ""; }