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Updated the HG19 reference from v0 to v1 after the v0 was zeroed out. 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5023 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
kshakir 2011-01-19 20:30:25 +00:00
parent af60666f5d
commit 2b895ffb7f
1 changed files with 2 additions and 1 deletions
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3
java/test/org/broadinstitute/sting/BaseTest.java
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@ -43,7 +43,7 @@ public abstract class BaseTest {
public static final Logger logger = CommandLineUtils.getStingLogger();
public static final String hg18Reference = "/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta";
public static final String hg19Reference = "/seq/references/Homo_sapiens_assembly19/v0/Homo_sapiens_assembly19.fasta";
public static final String hg19Reference = "/seq/references/Homo_sapiens_assembly19/v1/Homo_sapiens_assembly19.fasta";
public static final String b36KGReference = "/humgen/1kg/reference/human_b36_both.fasta";
public static final String b37KGReference = "/humgen/1kg/reference/human_g1k_v37.fasta";
public static final String GATKDataLocation = "/humgen/gsa-hpprojects/GATK/data/";
@ -62,6 +62,7 @@ public abstract class BaseTest {
public static final String hg18dbSNP129 = dbsnpDataLocation + "dbsnp_129_hg18.rod";
public static final String b36dbSNP129 = dbsnpDataLocation + "dbsnp_129_b36.rod";
public static final String b37dbSNP129 = dbsnpDataLocation + "dbsnp_129_b37.rod";
public static final String b37dbSNP132 = dbsnpDataLocation + "dbsnp_132_b37.vcf";
public final String testDir = "testdata/";