Fixing bug in TraverseDuplicates.printProgress call: only passes in single location of genome loc

2013-01-04 17:14:32 -05:00 · 2013-01-04 17:14:32 -05:00 · 2ab55e4ee7
parent 69bf70c42e
commit 2ab55e4ee7
1 changed files with 1 additions and 1 deletions
--- a/public/java/src/org/broadinstitute/sting/gatk/traversals/TraverseDuplicates.java
+++ b/public/java/src/org/broadinstitute/sting/gatk/traversals/TraverseDuplicates.java
@ -197,7 +197,7 @@ public class TraverseDuplicates<M,T> extends TraversalEngine<M,T,DuplicateWalker
            }

            updateCumulativeMetrics(dataProvider.getShard());
-            printProgress(site);
+            printProgress(site.getStopLocation());
            done = walker.isDone();
        }