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Bringing Laurent's Mendelian Violation changes to the main repo -- he promised to follow the guidelines next time

This commit is contained in:
Mauricio Carneiro 2011-12-12 09:52:08 -05:00
parent 1008c453ec 52c64b971f
commit 2a32ebe104
2 changed files with 3 additions and 3 deletions
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4
public/scala/test/org/broadinstitute/sting/queue/pipeline/DataProcessingPipelineTest.scala
View File

@ -41,7 +41,7 @@ class DataProcessingPipelineTest {
" -D " + BaseTest.testDir + "exampleDBSNP.vcf", " -D " + BaseTest.testDir + "exampleDBSNP.vcf",
" -nv ", " -nv ",
" -p " + projectName).mkString " -p " + projectName).mkString
spec.fileMD5s += testOut -> "69ba216bcf1e2dd9b6bd631ef99efda9" spec.fileMD5s += testOut -> "a9769a85f15e77505835068353ce4788"
PipelineTest.executeTest(spec) PipelineTest.executeTest(spec)
} }
@ -60,7 +60,7 @@ class DataProcessingPipelineTest {
" -bwa /home/unix/carneiro/bin/bwa", " -bwa /home/unix/carneiro/bin/bwa",
" -bwape ", " -bwape ",
" -p " + projectName).mkString " -p " + projectName).mkString
spec.fileMD5s += testOut -> "3134cbeae1561ff8e6b559241f9ed7f5" spec.fileMD5s += testOut -> "fad1fd2e69287c1beb423ce17fa464d6"
PipelineTest.executeTest(spec) PipelineTest.executeTest(spec)
} }

2
public/scala/test/org/broadinstitute/sting/queue/pipeline/PacbioProcessingPipelineTest.scala
View File

@ -39,7 +39,7 @@ class PacbioProcessingPipelineTest {
" -i " + BaseTest.testDir + "exampleBAM.bam", " -i " + BaseTest.testDir + "exampleBAM.bam",
" -blasr ", " -blasr ",
" -D " + BaseTest.testDir + "exampleDBSNP.vcf").mkString " -D " + BaseTest.testDir + "exampleDBSNP.vcf").mkString
spec.fileMD5s += testOut -> "91a88b51d00cec40596d6061aa0c9938" spec.fileMD5s += testOut -> "3a23c96063743ddbc35897331433e205"
PipelineTest.executeTest(spec) PipelineTest.executeTest(spec)
} }
} }