diff --git a/java/src/org/broadinstitute/sting/playground/tools/SortROD.java b/java/src/org/broadinstitute/sting/playground/tools/SortROD.java index 229d3be60..3516863ef 100644 --- a/java/src/org/broadinstitute/sting/playground/tools/SortROD.java +++ b/java/src/org/broadinstitute/sting/playground/tools/SortROD.java @@ -43,7 +43,6 @@ import java.io.*; import java.util.*; import net.sf.samtools.util.SortingCollection; -import net.sf.samtools.SAMSequenceDictionary; import net.sf.picard.reference.ReferenceSequenceFile; import net.sf.picard.reference.ReferenceSequenceFileFactory; @@ -69,7 +68,7 @@ public class SortROD { */ public static void main(String[] args) { BasicConfigurator.configure(); - + logger.setLevel(org.apache.log4j.Level.INFO); // check yourself before you wreck yourself - we require one arg, the input file if (args.length != 3 ) printUsage();