From 260fd0dc457b52dcc9dad88fea841614b5706b10 Mon Sep 17 00:00:00 2001 From: depristo Date: Fri, 12 Jun 2009 19:11:28 +0000 Subject: [PATCH] Trivial change git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1000 348d0f76-0448-11de-a6fe-93d51630548a --- python/MergeBamsByKey.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/python/MergeBamsByKey.py b/python/MergeBamsByKey.py index fbac2cc7f..8732bcc0f 100755 --- a/python/MergeBamsByKey.py +++ b/python/MergeBamsByKey.py @@ -77,6 +77,6 @@ by key and spawn merge and index jobs to merge all of the files sharing the same jobid = farm_commands.cmd(cmd, OPTIONS.farmQueue, output, just_print_commands = OPTIONS.dry) if OPTIONS.ignoreExistingFiles or not os.path.exists(spec.getMergedBAMIndex()): - pass - jobid = farm_commands.cmd(spec.getIndexCmd(), OPTIONS.farmQueue, '', waitID = jobid, just_print_commands = OPTIONS.dry) + #pass + jobid = farm_commands.cmd(spec.getIndexCmd(), OPTIONS.farmQueue, None, waitID = jobid, just_print_commands = OPTIONS.dry)