Oops, missed this test before when updating md5s
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@ -349,7 +349,7 @@ public class UnifiedGenotyperIntegrationTest extends WalkerTest {
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WalkerTest.WalkerTestSpec spec2 = new WalkerTest.WalkerTestSpec(
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baseCommandIndels + " --genotyping_mode GENOTYPE_GIVEN_ALLELES -alleles " + result.get(0).getAbsolutePath() + " -I " + validationDataLocation +
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"low_coverage_CEU.chr1.10k-11k.bam -o %s -L 1:10450700-10551000", 1,
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Arrays.asList("1a4d856bfe53d9acee0ea303c4b83bb1"));
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Arrays.asList("c7792e27477ecf99893a76ecbac5c2f9"));
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executeTest("test MultiSample Pilot1 CEU indels using GENOTYPE_GIVEN_ALLELES", spec2);
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}
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