diff --git a/packages/GenomeAnalysisTK.xml b/packages/GenomeAnalysisTK.xml index 499546732..e75aebed7 100644 --- a/packages/GenomeAnalysisTK.xml +++ b/packages/GenomeAnalysisTK.xml @@ -3,14 +3,20 @@ GenomeAnalysisTK org.broadinstitute.sting.gatk.CommandLineGATK + org.broadinstitute.sting.gatk.walkers.CountLociWalker + org.broadinstitute.sting.gatk.walkers.CountReadsWalker org.broadinstitute.sting.gatk.walkers.DepthOfCoverageWalker org.broadinstitute.sting.gatk.walkers.PileupWalker org.broadinstitute.sting.gatk.walkers.PrintReadsWalker + org.broadinstitute.sting.gatk.walkers.ValidatingPileupWalker + java/src/org/broadinstitute/sting/gatk/walkers/CountReads.java + java/src/org/broadinstitute/sting/gatk/walkers/CountLoci.java java/src/org/broadinstitute/sting/gatk/walkers/DepthOfCoverageWalker.java java/src/org/broadinstitute/sting/gatk/walkers/PileupWalker.java java/src/org/broadinstitute/sting/gatk/walkers/PrintReadsWalker.java + java/src/org/broadinstitute/sting/gatk/walkers/ValidatingPileupWalker.java java/src/org/broadinstitute/sting/gatk/examples/HelloWalker.java java/src/org/broadinstitute/sting/gatk/examples/build.xml testdata/exampleBAM.bam