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Merged bug fix from Stable into Unstable

This commit is contained in:
Eric Banks 2013-01-08 12:59:15 -05:00
parent b099e2b4ae d6146d369a
commit 245fcc8bb5
1 changed files with 0 additions and 44 deletions
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44
public/java/src/org/broadinstitute/sting/utils/help/HelpConstants.java
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@ -24,13 +24,6 @@
package org.broadinstitute.sting.utils.help; package org.broadinstitute.sting.utils.help;
import com.sun.javadoc.FieldDoc;
import com.sun.javadoc.PackageDoc;
import com.sun.javadoc.ProgramElementDoc;
import org.broadinstitute.sting.utils.classloader.JVMUtils;
import java.lang.reflect.Field;
public class HelpConstants { public class HelpConstants {
public final static String BASE_GATK_URL = "http://www.broadinstitute.org/gatk"; public final static String BASE_GATK_URL = "http://www.broadinstitute.org/gatk";
@ -41,41 +34,4 @@ public class HelpConstants {
public static String forumPost(String post) { public static String forumPost(String post) {
return GATK_FORUM_URL + post; return GATK_FORUM_URL + post;
} }
protected static boolean assignableToClass(ProgramElementDoc classDoc, Class lhsClass, boolean requireConcrete) {
try {
Class type = getClassForDoc(classDoc);
return lhsClass.isAssignableFrom(type) && (!requireConcrete || JVMUtils.isConcrete(type));
} catch (Throwable t) {
// Ignore errors.
return false;
}
}
protected static Class getClassForDoc(ProgramElementDoc doc) throws ClassNotFoundException {
return Class.forName(getClassName(doc));
}
protected static Field getFieldForFieldDoc(FieldDoc fieldDoc) {
try {
Class clazz = getClassForDoc(fieldDoc.containingClass());
return JVMUtils.findField(clazz, fieldDoc.name());
} catch (ClassNotFoundException e) {
throw new RuntimeException(e);
}
}
/**
* Reconstitute the class name from the given class JavaDoc object.
*
* @param doc the Javadoc model for the given class.
* @return The (string) class name of the given class.
*/
protected static String getClassName(ProgramElementDoc doc) {
PackageDoc containingPackage = doc.containingPackage();
return containingPackage.name().length() > 0 ?
String.format("%s.%s", containingPackage.name(), doc.name()) :
String.format("%s", doc.name());
}
} }