diff --git a/python/analyzeRunReports.py b/python/analyzeRunReports.py index a779b7751..683f40f35 100755 --- a/python/analyzeRunReports.py +++ b/python/analyzeRunReports.py @@ -205,7 +205,7 @@ class RecordAsTable(StageHandler): try: print >> self.out, "\t".join([ oneField(field) for field in self.decoder.fields ]) except: - print 'Failed to convert to table ', parsed + #print 'Failed to convert to table ', parsed pass addHandler('table', RecordAsTable) diff --git a/shell/runGATKReport.csh b/shell/runGATKReport.csh index c192807dd..b7cd22e00 100755 --- a/shell/runGATKReport.csh +++ b/shell/runGATKReport.csh @@ -26,7 +26,7 @@ python $GATK/python/analyzeRunReports.py summary $ARCHIVE.gz --max_days 1 --no-d python $GATK/python/analyzeRunReports.py exceptions $ARCHIVE.gz --max_days 1 -E sting --no-dev echo "Archive directory contents" -ls -ltrh $ARCHIVE_DIR +du -sh $ARCHIVE_DIR foreach maxDays ( 7 30 360 ) echo "Creating table"