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bug caused by a misprint: context != contexts 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3073 348d0f76-0448-11de-a6fe-93d51630548a
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ebanks 2010-03-25 03:08:24 +00:00
parent 3176715c74
commit 2373a4618f
1 changed files with 1 additions and 1 deletions
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2
java/src/org/broadinstitute/sting/oneoffprojects/walkers/varianteval2/VariantEval2Walker.java
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@ -493,7 +493,7 @@ public class VariantEval2Walker extends RodWalker<Integer, Integer> {
RefMetaDataTracker tracker, AlignmentContext context, boolean allowExcludes ) {
for ( String name : names ) {
Collection<VariantContext> contexts = tracker.getVariantContexts(name, ALLOW_VARIANT_CONTEXT_TYPES, context.getLocation(), true, true);
if ( context.size() > 1 )
if ( contexts.size() > 1 )
throw new StingException("Found multiple variant contexts at " + context.getLocation());
VariantContext vc = contexts.size() == 1 ? contexts.iterator().next() : null;