diff --git a/.gitignore b/.gitignore
index 65f111587..2559c7747 100644
--- a/.gitignore
+++ b/.gitignore
@@ -24,3 +24,4 @@ dump/
 lib/
 out/
 /atlassian-ide-plugin.xml
+maven-metadata-local.xml
diff --git a/protected/gatk-protected/src/test/java/org/broadinstitute/sting/gatk/walkers/variantutils/SelectVariantsParallelIntegrationTest.java b/protected/gatk-protected/src/test/java/org/broadinstitute/sting/gatk/walkers/variantutils/SelectVariantsParallelIntegrationTest.java
index 4d7fa28ad..68eb1cc41 100644
--- a/protected/gatk-protected/src/test/java/org/broadinstitute/sting/gatk/walkers/variantutils/SelectVariantsParallelIntegrationTest.java
+++ b/protected/gatk-protected/src/test/java/org/broadinstitute/sting/gatk/walkers/variantutils/SelectVariantsParallelIntegrationTest.java
@@ -92,6 +92,11 @@ public class SelectVariantsParallelIntegrationTest extends WalkerTest {
                 final String args = "-select 'DP > 30' -V " + testfile;
                 new ParallelSelectTestProvider(b37KGReference, args, "c64b45a14d41b1e5cddbe036b47e7519", nt);
             }
+            { // AD and PL decoding race condition
+                final String testfile = privateTestDir + "race_condition.vcf";
+                final String args = "-env -sn SAMPLE -L 1:1-10,000,000 -V " + testfile;
+                new ParallelSelectTestProvider(b37KGReference, args, "62e6156387d6e91bd2b08ef649cb1129", nt);
+            }
         }
 
         return ParallelSelectTestProvider.getTests(ParallelSelectTestProvider.class);
diff --git a/public/repo/net/sf/picard/1.107.1676/picard-1.107.1676.jar b/public/repo/net/sf/picard/1.107.1676/picard-1.107.1676.jar
new file mode 100644
index 000000000..dee7d931b
Binary files /dev/null and b/public/repo/net/sf/picard/1.107.1676/picard-1.107.1676.jar differ
diff --git a/public/repo/net/sf/picard/1.107.1676/picard-1.107.1676.pom b/public/repo/net/sf/picard/1.107.1676/picard-1.107.1676.pom
new file mode 100644
index 000000000..6fa774352
--- /dev/null
+++ b/public/repo/net/sf/picard/1.107.1676/picard-1.107.1676.pom
@@ -0,0 +1,44 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+    <modelVersion>4.0.0</modelVersion>
+    <groupId>net.sf</groupId>
+    <artifactId>picard</artifactId>
+    <version>1.107.1676</version>
+    <name>picard</name>
+    <dependencies>
+        <dependency>
+            <groupId>net.sf</groupId>
+            <artifactId>sam</artifactId>
+            <version>1.107.1676</version>
+        </dependency>
+        <dependency>
+            <groupId>org.broadinstitute</groupId>
+            <artifactId>variant</artifactId>
+            <version>1.107.1676</version>
+        </dependency>
+        <dependency>
+            <groupId>org.broad</groupId>
+            <artifactId>tribble</artifactId>
+            <version>1.107.1676</version>
+        </dependency>
+        <!-- TODO: Picard is using a custom zip with just ant's BZip2 classes. See also: http://www.kohsuke.org/bzip2 -->
+        <dependency>
+            <groupId>org.apache.ant</groupId>
+            <artifactId>ant</artifactId>
+            <version>1.8.2</version>
+            <exclusions>
+                <exclusion>
+                    <groupId>org.apache.ant</groupId>
+                    <artifactId>ant-launcher</artifactId>
+                </exclusion>
+            </exclusions>
+        </dependency>
+        <dependency>
+            <groupId>com.sun</groupId>
+            <artifactId>tools.jar</artifactId>
+            <version>1.5</version>
+            <classifier>system</classifier>
+            <systemPath>${java.home}../lib/tools.jar</systemPath>
+        </dependency>
+    </dependencies>
+</project>
diff --git a/public/repo/net/sf/sam/1.107.1676/sam-1.107.1676.jar b/public/repo/net/sf/sam/1.107.1676/sam-1.107.1676.jar
new file mode 100644
index 000000000..65549cf8d
Binary files /dev/null and b/public/repo/net/sf/sam/1.107.1676/sam-1.107.1676.jar differ
diff --git a/public/repo/net/sf/sam/1.107.1676/sam-1.107.1676.pom b/public/repo/net/sf/sam/1.107.1676/sam-1.107.1676.pom
new file mode 100644
index 000000000..0acfb99ba
--- /dev/null
+++ b/public/repo/net/sf/sam/1.107.1676/sam-1.107.1676.pom
@@ -0,0 +1,21 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+    <modelVersion>4.0.0</modelVersion>
+    <groupId>net.sf</groupId>
+    <artifactId>sam</artifactId>
+    <version>1.107.1676</version>
+    <name>sam-jdk</name>
+    <dependencies>
+        <dependency>
+            <groupId>org.testng</groupId>
+            <artifactId>testng</artifactId>
+            <version>5.5</version>
+            <classifier>jdk15</classifier>
+        </dependency>
+        <dependency>
+            <groupId>org.xerial.snappy</groupId>
+            <artifactId>snappy-java</artifactId>
+            <version>1.0.3-rc3</version>
+        </dependency>
+    </dependencies>
+</project>
diff --git a/public/repo/org/broad/tribble/1.107.1676/tribble-1.107.1676.jar b/public/repo/org/broad/tribble/1.107.1676/tribble-1.107.1676.jar
new file mode 100644
index 000000000..78e5a479f
Binary files /dev/null and b/public/repo/org/broad/tribble/1.107.1676/tribble-1.107.1676.jar differ
diff --git a/public/repo/org/broad/tribble/1.107.1676/tribble-1.107.1676.pom b/public/repo/org/broad/tribble/1.107.1676/tribble-1.107.1676.pom
new file mode 100644
index 000000000..264cfe57b
--- /dev/null
+++ b/public/repo/org/broad/tribble/1.107.1676/tribble-1.107.1676.pom
@@ -0,0 +1,15 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+    <modelVersion>4.0.0</modelVersion>
+    <groupId>org.broad</groupId>
+    <artifactId>tribble</artifactId>
+    <version>1.107.1676</version>
+    <name>tribble</name>
+    <dependencies>
+        <dependency>
+            <groupId>net.sf</groupId>
+            <artifactId>sam</artifactId>
+            <version>1.107.1676</version>
+        </dependency>
+    </dependencies>
+</project>
diff --git a/public/repo/org/broadinstitute/variant/1.107.1676/variant-1.107.1676.jar b/public/repo/org/broadinstitute/variant/1.107.1676/variant-1.107.1676.jar
new file mode 100644
index 000000000..57c260852
Binary files /dev/null and b/public/repo/org/broadinstitute/variant/1.107.1676/variant-1.107.1676.jar differ
diff --git a/public/repo/org/broadinstitute/variant/1.107.1676/variant-1.107.1676.pom b/public/repo/org/broadinstitute/variant/1.107.1676/variant-1.107.1676.pom
new file mode 100644
index 000000000..ec3709347
--- /dev/null
+++ b/public/repo/org/broadinstitute/variant/1.107.1676/variant-1.107.1676.pom
@@ -0,0 +1,31 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+    <modelVersion>4.0.0</modelVersion>
+    <groupId>org.broadinstitute</groupId>
+    <artifactId>variant</artifactId>
+    <version>1.107.1676</version>
+    <name>variant</name>
+    <dependencies>
+        <dependency>
+            <groupId>org.broad</groupId>
+            <artifactId>tribble</artifactId>
+            <version>1.107.1676</version>
+        </dependency>
+        <dependency>
+            <groupId>net.sf</groupId>
+            <artifactId>sam</artifactId>
+            <version>1.107.1676</version>
+        </dependency>
+        <dependency>
+            <groupId>org.apache.commons</groupId>
+            <artifactId>commons-jexl</artifactId>
+            <version>2.1.1</version>
+        </dependency>
+        <!-- TODO: This artifact is only in the Sting local repo, not in central, yet. -->
+        <dependency>
+            <groupId>com.google.code.cofoja</groupId>
+            <artifactId>cofoja</artifactId>
+            <version>1.0-r139</version>
+        </dependency>
+    </dependencies>
+</project>
diff --git a/public/sting-root/pom.xml b/public/sting-root/pom.xml
index 080ed05c4..0179d026f 100644
--- a/public/sting-root/pom.xml
+++ b/public/sting-root/pom.xml
@@ -59,12 +59,18 @@
             <dependency>
                 <groupId>net.sf</groupId>
                 <artifactId>sam</artifactId>
-                <version>1.104.1628</version>
+                <version>1.107.1676</version>
+                <exclusions>
+                    <exclusion>
+                        <groupId>org.testng</groupId>
+                        <artifactId>testng</artifactId>
+                    </exclusion>
+                </exclusions>
             </dependency>
             <dependency>
                 <groupId>net.sf</groupId>
                 <artifactId>picard</artifactId>
-                <version>1.104.1628</version>
+                <version>1.107.1676</version>
             </dependency>
             <dependency>
                 <groupId>edu.mit.broad</groupId>
@@ -74,12 +80,12 @@
             <dependency>
                 <groupId>org.broad</groupId>
                 <artifactId>tribble</artifactId>
-                <version>1.104.1628</version>
+                <version>1.107.1676</version>
             </dependency>
             <dependency>
                 <groupId>org.broadinstitute</groupId>
                 <artifactId>variant</artifactId>
-                <version>1.105.1642</version>
+                <version>1.107.1676</version>
             </dependency>
             <dependency>
                 <groupId>log4j</groupId>