No need to double overload the file constructor

2011-07-15 15:19:10 -04:00 · 2011-07-15 15:19:10 -04:00 · 224d373997
parent 633b764877
commit 224d373997
1 changed files with 1 additions and 1 deletions
--- a/public/scala/src/org/broadinstitute/sting/queue/util/QScriptUtils.scala
+++ b/public/scala/src/org/broadinstitute/sting/queue/util/QScriptUtils.scala
@ -38,7 +38,7 @@ object QScriptUtils {
   * Returns the number of contigs in the BAM file header.
   */
  def getNumberOfContigs(bamFile: File): Int = {
-    val samReader = new SAMFileReader(new File(bamFile))
+    val samReader = new SAMFileReader(bamFile)
    samReader.getFileHeader.getSequenceDictionary.getSequences.size()
  }