Changed the INFO field delimiter from a comma to a semicolon

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2847 348d0f76-0448-11de-a6fe-93d51630548a
2010-02-16 20:44:57 +00:00 · 2010-02-16 20:44:57 +00:00 · 217deb9809
parent 653f70efa2
commit 217deb9809
1 changed files with 1 additions and 1 deletions
--- a/python/AnnotateVCFwithMAF.py
+++ b/python/AnnotateVCFwithMAF.py
@ -22,7 +22,7 @@ for record in maf_gen:
    for index,header in enumerate(headers):
        if record.has_key(header):
            if index > 0:
-                info_string += ","
+                info_string += ";"
            info_string += "%s=%s" % (header, record[header])

    locus = record["chr"]+":"+record["start"]