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Extend regex that supports every 'word' character to use any printable character except ':'. 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2807 348d0f76-0448-11de-a6fe-93d51630548a
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hanna 2010-02-08 03:29:55 +00:00
parent 4fe851a83d
commit 21369869b7
1 changed files with 1 additions and 1 deletions
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2
java/src/org/broadinstitute/sting/utils/GenomeLocParser.java
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@ -54,7 +54,7 @@ import java.util.regex.Pattern;
public class GenomeLocParser { public class GenomeLocParser {
private static Logger logger = Logger.getLogger(GenomeLocParser.class); private static Logger logger = Logger.getLogger(GenomeLocParser.class);
private static final Pattern mPattern = Pattern.compile("([\\w&&[^:]]+):*([\\d,]+)?([\\+-])?([\\d,]+)?$"); // matches case 3 private static final Pattern mPattern = Pattern.compile("([\\p{Print}&&[^:]]+):*([\\d,]+)?([\\+-])?([\\d,]+)?$"); // matches case 3
// -------------------------------------------------------------------------------------------------------------- // --------------------------------------------------------------------------------------------------------------