Add extra logging to the GATK run report at the start of metrics aggregation.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4529 348d0f76-0448-11de-a6fe-93d51630548a
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@ -172,6 +172,8 @@ public class GATKRunReport {
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if ( type == PhoneHomeOption.NO_ET )
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throw new ReviewedStingException("Trying to create a run report when type is NO_ET!");
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logger.info("Aggregating data for run report");
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mGATKHeader = CommandLineGATK.createApplicationHeader();
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currentPath = System.getProperty("user.dir");
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