diff --git a/settings/repository/edu.mit.broad/picard-private-parts-1959.jar b/settings/repository/edu.mit.broad/picard-private-parts-2034.jar
similarity index 62%
rename from settings/repository/edu.mit.broad/picard-private-parts-1959.jar
rename to settings/repository/edu.mit.broad/picard-private-parts-2034.jar
index ae11e636b..11f59420c 100644
Binary files a/settings/repository/edu.mit.broad/picard-private-parts-1959.jar and b/settings/repository/edu.mit.broad/picard-private-parts-2034.jar differ
diff --git a/settings/repository/edu.mit.broad/picard-private-parts-1959.xml b/settings/repository/edu.mit.broad/picard-private-parts-2034.xml
similarity index 64%
rename from settings/repository/edu.mit.broad/picard-private-parts-1959.xml
rename to settings/repository/edu.mit.broad/picard-private-parts-2034.xml
index e7c7e3a21..1a60a2015 100644
--- a/settings/repository/edu.mit.broad/picard-private-parts-1959.xml
+++ b/settings/repository/edu.mit.broad/picard-private-parts-2034.xml
@@ -1,3 +1,3 @@
 <ivy-module version="1.0">
-    <info organisation="edu.mit.broad" module="picard-private-parts" revision="1959" status="integration" publication="20110718185300" />
+    <info organisation="edu.mit.broad" module="picard-private-parts" revision="2034" status="integration" publication="20110718185300" />
 </ivy-module>
diff --git a/settings/repository/net.sf/picard-1.49.895.xml b/settings/repository/net.sf/picard-1.49.895.xml
deleted file mode 100644
index 52d4900c5..000000000
--- a/settings/repository/net.sf/picard-1.49.895.xml
+++ /dev/null
@@ -1,3 +0,0 @@
-<ivy-module version="1.0">
-    <info organisation="net.sf" module="picard" revision="1.49.895" status="release" />
-</ivy-module>
diff --git a/settings/repository/net.sf/picard-1.49.895.jar b/settings/repository/net.sf/picard-1.52.944.jar
similarity index 82%
rename from settings/repository/net.sf/picard-1.49.895.jar
rename to settings/repository/net.sf/picard-1.52.944.jar
index 3ee1f2090..e147ebbba 100644
Binary files a/settings/repository/net.sf/picard-1.49.895.jar and b/settings/repository/net.sf/picard-1.52.944.jar differ
diff --git a/settings/repository/net.sf/picard-1.52.944.xml b/settings/repository/net.sf/picard-1.52.944.xml
new file mode 100644
index 000000000..61fac6644
--- /dev/null
+++ b/settings/repository/net.sf/picard-1.52.944.xml
@@ -0,0 +1,3 @@
+<ivy-module version="1.0">
+    <info organisation="net.sf" module="picard" revision="1.52.944" status="release" />
+</ivy-module>
diff --git a/settings/repository/net.sf/sam-1.49.895.xml b/settings/repository/net.sf/sam-1.49.895.xml
deleted file mode 100644
index 0436ce881..000000000
--- a/settings/repository/net.sf/sam-1.49.895.xml
+++ /dev/null
@@ -1,3 +0,0 @@
-<ivy-module version="1.0">
-    <info organisation="net.sf" module="sam" revision="1.49.895" status="release" />
-</ivy-module>
diff --git a/settings/repository/net.sf/sam-1.49.895.jar b/settings/repository/net.sf/sam-1.52.944.jar
similarity index 76%
rename from settings/repository/net.sf/sam-1.49.895.jar
rename to settings/repository/net.sf/sam-1.52.944.jar
index c55ab0b72..7037c7a96 100644
Binary files a/settings/repository/net.sf/sam-1.49.895.jar and b/settings/repository/net.sf/sam-1.52.944.jar differ
diff --git a/settings/repository/net.sf/sam-1.52.944.xml b/settings/repository/net.sf/sam-1.52.944.xml
new file mode 100644
index 000000000..2229395b2
--- /dev/null
+++ b/settings/repository/net.sf/sam-1.52.944.xml
@@ -0,0 +1,3 @@
+<ivy-module version="1.0">
+    <info organisation="net.sf" module="sam" revision="1.52.944" status="release" />
+</ivy-module>