diff --git a/core/java/src/org/broadinstitute/sting/utils/Utils.java b/core/java/src/org/broadinstitute/sting/utils/Utils.java
index 0c1469948..e6878da51 100755
--- a/core/java/src/org/broadinstitute/sting/utils/Utils.java
+++ b/core/java/src/org/broadinstitute/sting/utils/Utils.java
@@ -202,7 +202,7 @@ public class Utils {
     }
 
     public static boolean setupRefContigOrdering(final ReferenceSequenceFile refFile) {
-        List<SAMSequenceRecord> refContigs = refFile.getSequenceDictionary();
+        List<SAMSequenceRecord> refContigs = refFile.getSequenceDictionary().getSequences();
         HashMap<String, Integer> refContigOrdering = new HashMap<String, Integer>();
 
         if ( refContigs != null ) {
diff --git a/ivy.xml b/ivy.xml
index 9307b6976..36d5f691d 100644
--- a/ivy.xml
+++ b/ivy.xml
@@ -3,7 +3,7 @@
   <dependencies>
     <dependency org="net.sf" name="functionalj" rev="latest.integration" />
     <dependency org="net.sf" name="sam" rev="latest.integration" />
-    <dependency org="edu.mit.broad" name="picard" rev="200903161458" />
+    <dependency org="edu.mit.broad" name="picard" rev="200903201733" />
     <dependency org="junit" name="junit" rev="4.4" />
     <dependency org="log4j" name="log4j" rev="1.2.15" />
     <dependency org="colt" name="colt" rev="1.2.0" />
diff --git a/playground/java/src/org/broadinstitute/sting/gatk/PrepareROD.java b/playground/java/src/org/broadinstitute/sting/gatk/PrepareROD.java
index 860cd9b78..4c37a05d1 100644
--- a/playground/java/src/org/broadinstitute/sting/gatk/PrepareROD.java
+++ b/playground/java/src/org/broadinstitute/sting/gatk/PrepareROD.java
@@ -47,7 +47,7 @@ public class PrepareROD extends CommandLineProgram {
 
         // Prepare the sort ordering w.r.t. the sequence dictionary
         final ReferenceSequenceFile refFile = ReferenceSequenceFileFactory.getReferenceSequenceFile(REF_FILE_ARG);
-        List<SAMSequenceRecord> refContigs = refFile.getSequenceDictionary();
+        List<SAMSequenceRecord> refContigs = refFile.getSequenceDictionary().getSequences();
         HashMap<String, Integer> refContigOrdering = new HashMap<String, Integer>();
 
         int i = 0;
diff --git a/settings/repository/edu.mit.broad/picard-200903161458.jar b/settings/repository/edu.mit.broad/picard-200903201733.jar
similarity index 53%
rename from settings/repository/edu.mit.broad/picard-200903161458.jar
rename to settings/repository/edu.mit.broad/picard-200903201733.jar
index c4d06edd8..fd59a6c7b 100644
Binary files a/settings/repository/edu.mit.broad/picard-200903161458.jar and b/settings/repository/edu.mit.broad/picard-200903201733.jar differ
diff --git a/settings/repository/edu.mit.broad/picard-200903161458.xml b/settings/repository/edu.mit.broad/picard-200903201733.xml
similarity index 63%
rename from settings/repository/edu.mit.broad/picard-200903161458.xml
rename to settings/repository/edu.mit.broad/picard-200903201733.xml
index bcf262e83..74cf83b01 100644
--- a/settings/repository/edu.mit.broad/picard-200903161458.xml
+++ b/settings/repository/edu.mit.broad/picard-200903201733.xml
@@ -1,3 +1,3 @@
 <ivy-module version="1.0">
-    <info organisation="edu.mit.broad" module="picard" revision="200903161458" status="integration" publication="20090316145800" />
+    <info organisation="edu.mit.broad" module="picard" revision="200903201733" status="integration" publication="20090320173300" />
 </ivy-module>