Added edu.mit.broad.picard to Queue packaged jar.

Added hack to workaround EDU.oswego namespace and staging on mac case-insensitive filesystems.

build.xml

@@ -957,6 +957,12 @@
     <!-- Unzip all classes from their current locations and assemble them in a staging directory -->
     <target name="stage" description="stage files for distribution">
         <mkdir dir="staging"/>
+        <!--
+            HACK: Create the edu directory before EDU on case-insensitive mac filesystems.
+            The ivy dependency colt -> concurrent contains an EDU.oswego package which
+            BCEL doesn't even pull in but messes up edu.mit.broad.
+          -->
+        <mkdir dir="staging/edu"/>
         <unjar dest="staging" overwrite="false">
           <fileset dir="${dist.dir}">
             <patternset refid="dependency.mask" />

public/packages/Queue.xml

@@ -41,6 +41,7 @@
 
             <!-- Picard -->
             <package name="net.sf.picard.**" />
+            <package name="edu.mit.broad.picard.**" />
 
             <!-- JavaMail -->
             <package name="javax.activation.**" />