diff --git a/java/test/org/broadinstitute/sting/gatk/walkers/recalibration/RecalDataTest.java b/java/test/org/broadinstitute/sting/gatk/walkers/recalibration/RecalDataTest.java index dc0df6721..79ce1c709 100755 --- a/java/test/org/broadinstitute/sting/gatk/walkers/recalibration/RecalDataTest.java +++ b/java/test/org/broadinstitute/sting/gatk/walkers/recalibration/RecalDataTest.java @@ -11,6 +11,31 @@ import org.broadinstitute.sting.BaseTest; import org.broadinstitute.sting.utils.QualityUtils; import java.util.HashSet; +/* + * Copyright (c) 2009 The Broad Institute + * + * Permission is hereby granted, free of charge, to any person + * obtaining a copy of this software and associated documentation + * files (the "Software"), to deal in the Software without + * restriction, including without limitation the rights to use, + * copy, modify, merge, publish, distribute, sublicense, and/or sell + * copies of the Software, and to permit persons to whom the + * Software is furnished to do so, subject to the following + * conditions: + * + * The above copyright notice and this permission notice shall be + * included in all copies or substantial portions of the Software. + * + * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, + * EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES + * OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND + * NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT + * HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, + * WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING + * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR + * OTHER DEALINGS IN THE SOFTWARE. + */ + /** * Basic unit test for RecalData */ @@ -72,7 +97,7 @@ public class RecalDataTest extends BaseTest { datum.B = 1; datum.N = 1; Assert.assertEquals(datum.empiricalQualDouble(), 0.0, 1e-5); - Assert.assertEquals(datum.empiricalQualByte(), 0); + Assert.assertEquals(datum.empiricalQualByte(), 1); datum.B = 1; datum.N = 2;