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a fix to make the test run 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1120 348d0f76-0448-11de-a6fe-93d51630548a
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aaron 2009-06-29 20:24:32 +00:00
parent a17bf145f6
commit 1dcababad1
1 changed files with 26 additions and 1 deletions
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27
java/test/org/broadinstitute/sting/gatk/walkers/recalibration/RecalDataTest.java
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@ -11,6 +11,31 @@ import org.broadinstitute.sting.BaseTest;
import org.broadinstitute.sting.utils.QualityUtils;
import java.util.HashSet;
/*
* Copyright (c) 2009 The Broad Institute
*
* Permission is hereby granted, free of charge, to any person
* obtaining a copy of this software and associated documentation
* files (the "Software"), to deal in the Software without
* restriction, including without limitation the rights to use,
* copy, modify, merge, publish, distribute, sublicense, and/or sell
* copies of the Software, and to permit persons to whom the
* Software is furnished to do so, subject to the following
* conditions:
*
* The above copyright notice and this permission notice shall be
* included in all copies or substantial portions of the Software.
*
* THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
* EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
* OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
* NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
* HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
* WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
* FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
* OTHER DEALINGS IN THE SOFTWARE.
*/
/**
* Basic unit test for RecalData
*/
@ -72,7 +97,7 @@ public class RecalDataTest extends BaseTest {
datum.B = 1;
datum.N = 1;
Assert.assertEquals(datum.empiricalQualDouble(), 0.0, 1e-5);
Assert.assertEquals(datum.empiricalQualByte(), 0);
Assert.assertEquals(datum.empiricalQualByte(), 1);
datum.B = 1;
datum.N = 2;