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Adding another example call set to GATK resource bundle for use in VQSR wiki tutorial 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5774 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
rpoplin 2011-05-05 21:16:33 +00:00
parent b94d8dae17
commit 1d11e88899
1 changed files with 6 additions and 0 deletions
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6
scala/qscript/core/GATKResourcesBundle.scala
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@ -125,6 +125,12 @@ class GATKResourcesBundle extends QScript {
addResource(new Resource("/humgen/gsa-hpprojects/GATK/data/Comparisons/Unvalidated/AFR+EUR+ASN+1KG.dindel_august_release_merged_pilot1.20110126.sites.vcf", addResource(new Resource("/humgen/gsa-hpprojects/GATK/data/Comparisons/Unvalidated/AFR+EUR+ASN+1KG.dindel_august_release_merged_pilot1.20110126.sites.vcf",
"1000G_indels_for_realignment", b37, true, false)) "1000G_indels_for_realignment", b37, true, false))
//
// example call set for wiki tutorial
//
addResource(new Resource("/humgen/gsa-hpprojects/NA12878Collection/exampleCalls/NA12878.HiSeq.WGS.bwa.cleaned.raw.hg19.subset.vcf",
"NA12878.HiSeq.WGS.bwa.cleaned.raw.subset", b37, true, true))
// //
// Test BAM file, specific to each reference // Test BAM file, specific to each reference
// //