diff --git a/java/src/org/broadinstitute/sting/gatk/LocusContext.java b/java/src/org/broadinstitute/sting/gatk/LocusContext.java index 11d66be49..3492ea5e0 100755 --- a/java/src/org/broadinstitute/sting/gatk/LocusContext.java +++ b/java/src/org/broadinstitute/sting/gatk/LocusContext.java @@ -34,6 +34,11 @@ public class LocusContext { * @param offsets */ public LocusContext(GenomeLoc loc, List reads, List offsets) { + assert loc != null; + assert loc.getContig() != null; + assert reads != null; + assert offsets != null; + this.loc = loc; this.reads = reads; this.offsets = offsets;