From 1bd1404aa9d82eaa42f1efb395252c7eab6dad48 Mon Sep 17 00:00:00 2001
From: depristo <depristo@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Tue, 24 May 2011 19:17:18 +0000
Subject: [PATCH] Sometimes md5s can be null

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5867 348d0f76-0448-11de-a6fe-93d51630548a
---
 java/test/org/broadinstitute/sting/WalkerTest.java | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/java/test/org/broadinstitute/sting/WalkerTest.java b/java/test/org/broadinstitute/sting/WalkerTest.java
index a51568cc3..1b8b4206a 100755
--- a/java/test/org/broadinstitute/sting/WalkerTest.java
+++ b/java/test/org/broadinstitute/sting/WalkerTest.java
@@ -230,7 +230,7 @@ public class WalkerTest extends BaseTest {
      * @return a pair of file and string lists
      */
     private Pair<List<File>, List<String>> executeTest(String name, File outputFileLocation, List<String> md5s, List<File> tmpFiles, String args, Class expectedException) {
-        qcMD5s(name, md5s);
+        if ( md5s != null ) qcMD5s(name, md5s);
 
         if (outputFileLocation != null)
             args += " -o " + outputFileLocation.getAbsolutePath();