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Due to the approximation not being well-founded in this case, (and the non-existence of a pre-computed table at this time), pushing up the cutoff 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5405 348d0f76-0448-11de-a6fe-93d51630548a
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chartl 2011-03-08 16:24:42 +00:00
parent 00ac51acc8
commit 1b310401fe
1 changed files with 1 additions and 1 deletions
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java/src/org/broadinstitute/sting/utils/MannWhitneyU.java
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@ -71,7 +71,7 @@ public class MannWhitneyU {
} else if ( n > 4 && m > 7 ) { } else if ( n > 4 && m > 7 ) {
// large m, small n - sum uniform approx // large m, small n - sum uniform approx
pval = calculatePUniformApproximation(n,m,u); pval = calculatePUniformApproximation(n,m,u);
} else if ( n > 5 || m > 5 ) { } else if ( n > 8 || m > 8 ) {
pval = calculatePFromTable(n,m,u); pval = calculatePFromTable(n,m,u);
} else { } else {
// small m [possibly small n] - full approx // small m [possibly small n] - full approx