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Fixed an NA12878 Knowledgebase test, and made the RDQ option for BQSR binning hidden

This commit is contained in:
Mark Fleharty 2015-10-26 14:29:06 -04:00
parent ab247e7570
commit 19af5724c5
1 changed files with 1 additions and 1 deletions
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public/gatk-engine/src/main/java/org/broadinstitute/gatk/engine/arguments/GATKArgumentCollection.java
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@ -352,7 +352,7 @@ public class GATKArgumentCollection {
* probability space to the nearest bin. When roundDown = true, the value is rounded to the nearest bin
* that is smaller than the current bin.
*/
@Advanced
@Hidden
@Argument(fullName="round_down_quantized", shortName = "RDQ", doc = "Round quals down to nearest quantized qual", required=false, exclusiveOf="quantize_quals")
public boolean roundDown = false;