diff --git a/public/java/src/org/broadinstitute/sting/utils/MathUtils.java b/public/java/src/org/broadinstitute/sting/utils/MathUtils.java index 75bb0151a..8c35119dd 100644 --- a/public/java/src/org/broadinstitute/sting/utils/MathUtils.java +++ b/public/java/src/org/broadinstitute/sting/utils/MathUtils.java @@ -1418,6 +1418,7 @@ public class MathUtils { return 1.0-(new ChiSquare(contingencyTable.length*contingencyTable[0].length,null)).cdf(chi); } +======= public static double marginalizedFisherExact(double[] spectrum1, double[] spectrum2, int ns1, int ns2) { int N = ns1 + ns2; int[] rowSums = { ns1, ns2 };