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updating Validate Variants deletion integration test

This commit is contained in:
Ryan Poplin 2011-09-09 13:39:08 -04:00
parent 9ada9b3ed4
commit 1953edcd2d
1 changed files with 2 additions and 2 deletions
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4
public/java/test/org/broadinstitute/sting/gatk/walkers/variantutils/ValidateVariantsIntegrationTest.java
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@ -117,12 +117,12 @@ public class ValidateVariantsIntegrationTest extends WalkerTest {
@Test @Test
public void testBadAllele2() { public void testBadAllele2() {
WalkerTestSpec spec = new WalkerTestSpec( WalkerTestSpec spec = new WalkerTestSpec(
baseTestString("validationExampleBad3.vcf", "ALLELES"), baseTestString("validationExampleBad3.vcf", "REF"),
0, 0,
UserException.MalformedFile.class UserException.MalformedFile.class
); );
executeTest("test bad alt allele", spec); executeTest("test bad ref allele in deletion", spec);
} }
} }