From 1876c9856adf9111b1b0055f746814f66353d13f Mon Sep 17 00:00:00 2001
From: depristo <depristo@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Sun, 12 Sep 2010 14:39:22 +0000
Subject: [PATCH] Moved stingexception

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4265 348d0f76-0448-11de-a6fe-93d51630548a
---
 .../broadinstitute/sting/gatk/refdata/PlinkRodUnitTest.java    | 2 +-
 .../org/broadinstitute/sting/utils/bed/BedParserUnitTest.java  | 3 ---
 .../sting/utils/genotype/glf/GLFWriterUnitTest.java            | 2 --
 3 files changed, 1 insertion(+), 6 deletions(-)

diff --git a/java/test/org/broadinstitute/sting/gatk/refdata/PlinkRodUnitTest.java b/java/test/org/broadinstitute/sting/gatk/refdata/PlinkRodUnitTest.java
index ec9c47258..342f05fac 100755
--- a/java/test/org/broadinstitute/sting/gatk/refdata/PlinkRodUnitTest.java
+++ b/java/test/org/broadinstitute/sting/gatk/refdata/PlinkRodUnitTest.java
@@ -4,7 +4,7 @@ import org.broadinstitute.sting.BaseTest;
 import org.broadinstitute.sting.oneoffprojects.variantcontext.Allele;
 import org.broadinstitute.sting.oneoffprojects.variantcontext.Genotype;
 import org.broadinstitute.sting.utils.fasta.IndexedFastaSequenceFile;
-import org.broadinstitute.sting.utils.StingException;
+import org.broadinstitute.sting.utils.exceptions.StingException;
 import org.broadinstitute.sting.utils.GenomeLocParser;
 import org.broadinstitute.sting.utils.GenomeLoc;
 import org.junit.BeforeClass;
diff --git a/java/test/org/broadinstitute/sting/utils/bed/BedParserUnitTest.java b/java/test/org/broadinstitute/sting/utils/bed/BedParserUnitTest.java
index eb21be98a..2599eedaa 100644
--- a/java/test/org/broadinstitute/sting/utils/bed/BedParserUnitTest.java
+++ b/java/test/org/broadinstitute/sting/utils/bed/BedParserUnitTest.java
@@ -1,8 +1,6 @@
 package org.broadinstitute.sting.utils.bed;
 
 import org.broadinstitute.sting.BaseTest;
-import org.broadinstitute.sting.utils.interval.IntervalMergingRule;
-import org.broadinstitute.sting.utils.StingException;
 import org.broadinstitute.sting.utils.GenomeLocParser;
 import org.broadinstitute.sting.utils.GenomeLoc;
 import org.junit.BeforeClass;
@@ -10,7 +8,6 @@ import org.junit.Test;
 import org.junit.Assert;
 
 import java.io.File;
-import java.io.FileNotFoundException;
 import java.util.List;
 
 import net.sf.picard.reference.IndexedFastaSequenceFile;
diff --git a/java/test/org/broadinstitute/sting/utils/genotype/glf/GLFWriterUnitTest.java b/java/test/org/broadinstitute/sting/utils/genotype/glf/GLFWriterUnitTest.java
index 30a77a276..f766b4bc5 100755
--- a/java/test/org/broadinstitute/sting/utils/genotype/glf/GLFWriterUnitTest.java
+++ b/java/test/org/broadinstitute/sting/utils/genotype/glf/GLFWriterUnitTest.java
@@ -3,7 +3,6 @@ package org.broadinstitute.sting.utils.genotype.glf;
 import org.broadinstitute.sting.BaseTest;
 import org.broadinstitute.sting.utils.GenomeLoc;
 import org.broadinstitute.sting.utils.GenomeLocParser;
-import org.broadinstitute.sting.utils.StingException;
 import org.broadinstitute.sting.utils.genotype.LikelihoodObject;
 import org.junit.Assert;
 import org.junit.Before;
@@ -11,7 +10,6 @@ import org.junit.BeforeClass;
 import org.junit.Test;
 
 import java.io.File;
-import java.io.FileNotFoundException;
 
 import net.sf.samtools.SAMSequenceRecord;
 import net.sf.picard.reference.IndexedFastaSequenceFile;