From 164a94a3d0c5a460ea81c68f8235d85c2dbe868b Mon Sep 17 00:00:00 2001 From: kiran Date: Tue, 22 Dec 2009 20:50:01 +0000 Subject: [PATCH] Modified the walker documentation so that the stray punctuation wouldn't cause the GATK to stop parsing the help documenation early (aka I changed one word). git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2429 348d0f76-0448-11de-a6fe-93d51630548a --- .../contamination/FindContaminatingReadGroupsWalker.java | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/java/src/org/broadinstitute/sting/playground/gatk/walkers/contamination/FindContaminatingReadGroupsWalker.java b/java/src/org/broadinstitute/sting/playground/gatk/walkers/contamination/FindContaminatingReadGroupsWalker.java index d6e0c884f..532ff7abd 100755 --- a/java/src/org/broadinstitute/sting/playground/gatk/walkers/contamination/FindContaminatingReadGroupsWalker.java +++ b/java/src/org/broadinstitute/sting/playground/gatk/walkers/contamination/FindContaminatingReadGroupsWalker.java @@ -24,7 +24,7 @@ import cern.jet.stat.Probability; /** * FindContaminatingReadGroupsWalker lists read groups in a single-sample BAM file that appear - * to be contaminants (i.e. a read group that's not actually associated with the sample) by searching + * to be contaminants (meaning a read group that's not actually associated with the sample) by searching * for evidence of systematic underperformance at likely homozygous-variant sites. * * @author Kiran Garimella