diff --git a/java/src/org/broadinstitute/sting/gatk/contexts/variantcontext/VariantContextUtils.java b/java/src/org/broadinstitute/sting/gatk/contexts/variantcontext/VariantContextUtils.java index a094707a1..03b7e6214 100755 --- a/java/src/org/broadinstitute/sting/gatk/contexts/variantcontext/VariantContextUtils.java +++ b/java/src/org/broadinstitute/sting/gatk/contexts/variantcontext/VariantContextUtils.java @@ -26,9 +26,9 @@ package org.broadinstitute.sting.gatk.contexts.variantcontext; import java.io.Serializable; import java.util.*; import org.apache.commons.jexl2.*; +import org.broad.tribble.util.popgen.HardyWeinbergCalculation; import org.broad.tribble.util.variantcontext.*; import org.broadinstitute.sting.utils.*; -import org.broadinstitute.sting.utils.genotype.HardyWeinbergCalculation; import org.broad.tribble.vcf.VCFConstants; public class VariantContextUtils { diff --git a/java/src/org/broadinstitute/sting/gatk/walkers/annotator/HardyWeinberg.java b/java/src/org/broadinstitute/sting/gatk/walkers/annotator/HardyWeinberg.java index 46058a826..22bbc874b 100755 --- a/java/src/org/broadinstitute/sting/gatk/walkers/annotator/HardyWeinberg.java +++ b/java/src/org/broadinstitute/sting/gatk/walkers/annotator/HardyWeinberg.java @@ -1,5 +1,6 @@ package org.broadinstitute.sting.gatk.walkers.annotator; +import org.broad.tribble.util.popgen.HardyWeinbergCalculation; import org.broad.tribble.util.variantcontext.Genotype; import org.broad.tribble.util.variantcontext.VariantContext; import org.broad.tribble.vcf.VCFHeaderLineType; @@ -8,7 +9,6 @@ import org.broadinstitute.sting.gatk.contexts.ReferenceContext; import org.broadinstitute.sting.gatk.contexts.StratifiedAlignmentContext; import org.broadinstitute.sting.gatk.refdata.RefMetaDataTracker; import org.broadinstitute.sting.gatk.walkers.annotator.interfaces.*; -import org.broadinstitute.sting.utils.genotype.HardyWeinbergCalculation; import org.broadinstitute.sting.utils.QualityUtils; import java.util.Map;