diff --git a/R/exomePostQC.R b/R/exomePostQC.R index 5ee5287ee..d840adf9d 100644 --- a/R/exomePostQC.R +++ b/R/exomePostQC.R @@ -156,7 +156,7 @@ perSamplePlots <- function(metricsBySamples) { sampleTextLabel <- geom_text(aes(label=Sample, size=highlightTextSizes)) sampleTextLabelScale <- scale_size("Highlighted samples", to=c(3,5), breaks=c(1,2), labels=c("regular", "highlighted")) xAxis <- scale_x_discrete("Sample (ordered by nSNPs)", formatter=function(x) "") - myRug <- geom_rug(position=jitter) + myRug <- geom_rug(position="jitter") #myRug <- geom_rug(aes(x = NULL)) measures = c("nSNPs", "tiTvRatio", "nSingletons", "nIndels", "nInsertions", "nDeletions", "deletionInsertionRatio")