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Adding contracts and unit tests for HaplotypeCaller LikelihoodCalculationEngine

This commit is contained in:
Ryan Poplin 2012-03-14 21:25:43 -04:00
parent 66411ea1e9
commit 1429ddcf55
1 changed files with 2 additions and 0 deletions
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2
public/java/src/org/broadinstitute/sting/utils/Haplotype.java
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@ -24,6 +24,7 @@
package org.broadinstitute.sting.utils; package org.broadinstitute.sting.utils;
import com.google.java.contract.Ensures;
import com.google.java.contract.Requires; import com.google.java.contract.Requires;
import net.sf.samtools.Cigar; import net.sf.samtools.Cigar;
import net.sf.samtools.CigarElement; import net.sf.samtools.CigarElement;
@ -79,6 +80,7 @@ public class Haplotype {
readLikelihoodsPerSample.put(sample, readLikelihoods); readLikelihoodsPerSample.put(sample, readLikelihoods);
} }
@Ensures({"result != null"})
public double[] getReadLikelihoods( final String sample ) { public double[] getReadLikelihoods( final String sample ) {
return readLikelihoodsPerSample.get(sample); return readLikelihoodsPerSample.get(sample);
} }