From 3477e092ea59640289de13e3b9720f5ea5d067fc Mon Sep 17 00:00:00 2001 From: Eric Banks Date: Fri, 19 Apr 2013 08:39:08 -0400 Subject: [PATCH] Minor: bump up the amount of cached log10 data in MathUtils so that Monkol can actually call 50K samples. --- public/java/src/org/broadinstitute/sting/utils/MathUtils.java | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/public/java/src/org/broadinstitute/sting/utils/MathUtils.java b/public/java/src/org/broadinstitute/sting/utils/MathUtils.java index d382d804f..f4644036f 100644 --- a/public/java/src/org/broadinstitute/sting/utils/MathUtils.java +++ b/public/java/src/org/broadinstitute/sting/utils/MathUtils.java @@ -54,7 +54,7 @@ public class MathUtils { private static final double JACOBIAN_LOG_TABLE_INV_STEP = 1.0 / JACOBIAN_LOG_TABLE_STEP; private static final double MAX_JACOBIAN_TOLERANCE = 8.0; private static final int JACOBIAN_LOG_TABLE_SIZE = (int) (MAX_JACOBIAN_TOLERANCE / JACOBIAN_LOG_TABLE_STEP) + 1; - private static final int MAXN = 50000; + private static final int MAXN = 70000; private static final int LOG10_CACHE_SIZE = 4 * MAXN; // we need to be able to go up to 2*(2N) when calculating some of the coefficients /**