Oops, got the logic wrong.
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a963b37424
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@ -207,7 +207,7 @@ public class GenomeAnalysisEngine {
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*/
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public boolean isGATKLite() {
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if ( isLiteVersion == null ) {
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isLiteVersion = new PluginManager<Object>(Object.class).exists(DummyProtectedWalkerName);
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isLiteVersion = !(new PluginManager<Object>(Object.class).exists(DummyProtectedWalkerName));
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}
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return isLiteVersion;
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}
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