I finally broke down and added a default documentation string to @Input for use in Queue scripts. It's not ideal, but I couldn't take any more queue scripts with doc="x" all over the place.

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5461 348d0f76-0448-11de-a6fe-93d51630548a
2011-03-17 18:05:25 +00:00 · 2011-03-17 18:05:25 +00:00 · 10466dc7d1
parent c1798a7dbc
commit 10466dc7d1
1 changed files with 1 additions and 1 deletions
--- a/java/src/org/broadinstitute/sting/commandline/Input.java
+++ b/java/src/org/broadinstitute/sting/commandline/Input.java
@ -55,7 +55,7 @@ public @interface Input {
     * --help argument is specified.
     * @return Doc string associated with this command-line argument.
     */
-    String doc();
+    String doc() default "Undocumented option";

    /**
     * Is this argument required.  If true, the command-line argument system will