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Merge pull request #1178 from broadinstitute/ms_ROCCurve 

ROCCurve High Confidence Mode
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meganshand 2015-10-22 09:19:13 -04:00
parent aa3087c0d1 a57500b2fc
commit 0d936b28c4
1 changed files with 1 additions and 0 deletions
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public/gatk-utils/src/main/java/org/broadinstitute/gatk/utils/GenomeLoc.java
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@ -62,6 +62,7 @@ public class GenomeLoc implements Comparable<GenomeLoc>, Serializable, HasGenome
// TODO - WARNING WARNING WARNING code somehow depends on the name of the contig being null! // TODO - WARNING WARNING WARNING code somehow depends on the name of the contig being null!
public static final GenomeLoc UNMAPPED = new GenomeLoc((String)null); public static final GenomeLoc UNMAPPED = new GenomeLoc((String)null);
public static final GenomeLoc WHOLE_GENOME = new GenomeLoc("all"); public static final GenomeLoc WHOLE_GENOME = new GenomeLoc("all");
public static final GenomeLoc END_OF_GENOME = new GenomeLoc("Y", 23, 59347566, 59347566);
public static final boolean isUnmapped(GenomeLoc loc) { public static final boolean isUnmapped(GenomeLoc loc) {
return loc == UNMAPPED; return loc == UNMAPPED;