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made booster distance a parameter 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1385 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
kcibul 2009-08-05 18:29:21 +00:00
parent 3b74b3ba74
commit 0d47798721
1 changed files with 2 additions and 1 deletions
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3
java/src/org/broadinstitute/sting/playground/gatk/walkers/HybSelPerformanceWalker.java
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@ -37,7 +37,8 @@ public class HybSelPerformanceWalker extends LocusWalker<Integer, HybSelPerforma
@Argument(fullName="booster", required=false, doc="interval list of booster baits")
public File BOOSTER_FILE;
public Integer BOOSTER_DISTANCE = 250; // how far away can a booster be to "hit" its target?
@Argument(fullName="booster_distance", required=false, doc="distance up to which a booster can affect a target")
public Integer BOOSTER_DISTANCE = 100; // how far away can a booster be to "hit" its target?
public static class TargetInfo {
public int counts = 0;