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Tried to do a bit of pre-commit refactoring and screwed it up. Fixed. 

Thanks to Ryan for identifying the problem.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4336 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
hanna 2010-09-23 18:17:29 +00:00
parent d6bd1debeb
commit 0c781968fb
1 changed files with 1 additions and 1 deletions
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2
java/src/org/broadinstitute/sting/gatk/io/stubs/VCFWriterStub.java
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@ -199,6 +199,6 @@ public class VCFWriterStub implements Stub<VCFWriter>, VCFWriter {
*/ */
private VCFHeaderLine getCommandLineArgumentHeaderLine() { private VCFHeaderLine getCommandLineArgumentHeaderLine() {
CommandLineExecutable executable = JVMUtils.getObjectOfType(argumentSources,CommandLineExecutable.class); CommandLineExecutable executable = JVMUtils.getObjectOfType(argumentSources,CommandLineExecutable.class);
return new VCFHeaderLine(executable.getAnalysisName(), "\"" + CommandLineUtils.createApproximateCommandLineArgumentString(argumentSources) + "\""); return new VCFHeaderLine(executable.getAnalysisName(), "\"" + CommandLineUtils.createApproximateCommandLineArgumentString(argumentSources.toArray()) + "\"");
} }
} }