From 0c781968fb4a4aef734e38b6672c962015a3a18b Mon Sep 17 00:00:00 2001 From: hanna Date: Thu, 23 Sep 2010 18:17:29 +0000 Subject: [PATCH] Tried to do a bit of pre-commit refactoring and screwed it up. Fixed. Thanks to Ryan for identifying the problem. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4336 348d0f76-0448-11de-a6fe-93d51630548a --- .../org/broadinstitute/sting/gatk/io/stubs/VCFWriterStub.java | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/java/src/org/broadinstitute/sting/gatk/io/stubs/VCFWriterStub.java b/java/src/org/broadinstitute/sting/gatk/io/stubs/VCFWriterStub.java index f9b86665e..1a1981300 100755 --- a/java/src/org/broadinstitute/sting/gatk/io/stubs/VCFWriterStub.java +++ b/java/src/org/broadinstitute/sting/gatk/io/stubs/VCFWriterStub.java @@ -199,6 +199,6 @@ public class VCFWriterStub implements Stub, VCFWriter { */ private VCFHeaderLine getCommandLineArgumentHeaderLine() { CommandLineExecutable executable = JVMUtils.getObjectOfType(argumentSources,CommandLineExecutable.class); - return new VCFHeaderLine(executable.getAnalysisName(), "\"" + CommandLineUtils.createApproximateCommandLineArgumentString(argumentSources) + "\""); + return new VCFHeaderLine(executable.getAnalysisName(), "\"" + CommandLineUtils.createApproximateCommandLineArgumentString(argumentSources.toArray()) + "\""); } } \ No newline at end of file