diff --git a/public/java/src/org/broadinstitute/sting/utils/activeregion/ActivityProfile.java b/public/java/src/org/broadinstitute/sting/utils/activeregion/ActivityProfile.java
index 79b17cdba..1499f639d 100644
--- a/public/java/src/org/broadinstitute/sting/utils/activeregion/ActivityProfile.java
+++ b/public/java/src/org/broadinstitute/sting/utils/activeregion/ActivityProfile.java
@@ -127,10 +127,8 @@ public class ActivityProfile {
                     curStart = iii;
                 }
             }
+            returnList.add( createActiveRegion(isActive, curStart, isActiveList.size()-1, activeRegionExtension) ); // close out the current active region
 
-            if( curStart != isActiveList.size()-1 ) {
-                returnList.add( createActiveRegion(isActive, curStart, isActiveList.size()-1, activeRegionExtension) );
-            }
             return returnList;
         }
     }
diff --git a/public/java/test/org/broadinstitute/sting/utils/activeregion/ActivityProfileUnitTest.java b/public/java/test/org/broadinstitute/sting/utils/activeregion/ActivityProfileUnitTest.java
index e6d0322c0..e6df6d1be 100644
--- a/public/java/test/org/broadinstitute/sting/utils/activeregion/ActivityProfileUnitTest.java
+++ b/public/java/test/org/broadinstitute/sting/utils/activeregion/ActivityProfileUnitTest.java
@@ -110,10 +110,9 @@ public class ActivityProfileUnitTest extends BaseTest {
     @DataProvider(name = "BasicActivityProfileTestProvider")
     public Object[][] makeQualIntervalTestProvider() {
         new BasicActivityProfileTestProvider(Arrays.asList(1.0), true, 0, 1);
-        // TODO -- RYAN THESE ALL EXHIBIT AN OFF-BY-ONE ERROR.  SORRY I HAVE TO GO BUT I CANNOT FIX NOW
-        //new BasicActivityProfileTestProvider(Arrays.asList(1.0, 0.0), true, 0, 1, 2);
-        //new BasicActivityProfileTestProvider(Arrays.asList(0.0, 1.0), false, 0, 1, 2);
-        //new BasicActivityProfileTestProvider(Arrays.asList(1.0, 0.0, 1.0), true, 0, 1, 2, 3);
+        new BasicActivityProfileTestProvider(Arrays.asList(1.0, 0.0), true, 0, 1, 2);
+        new BasicActivityProfileTestProvider(Arrays.asList(0.0, 1.0), false, 0, 1, 2);
+        new BasicActivityProfileTestProvider(Arrays.asList(1.0, 0.0, 1.0), true, 0, 1, 2, 3);
         new BasicActivityProfileTestProvider(Arrays.asList(1.0, 1.0, 1.0), true, 0, 3);
 
         return BasicActivityProfileTestProvider.getTests(BasicActivityProfileTestProvider.class);