From 0c396f04a2fca38452aadeb81696da4e56db08df Mon Sep 17 00:00:00 2001
From: hanna <hanna@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Thu, 10 Dec 2009 19:23:13 +0000
Subject: [PATCH] Fix obvious cut/paste error in output stream management code.

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2313 348d0f76-0448-11de-a6fe-93d51630548a
---
 .../sting/gatk/io/storage/OutputStreamStorage.java              | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/java/src/org/broadinstitute/sting/gatk/io/storage/OutputStreamStorage.java b/java/src/org/broadinstitute/sting/gatk/io/storage/OutputStreamStorage.java
index 002951b99..33456456d 100644
--- a/java/src/org/broadinstitute/sting/gatk/io/storage/OutputStreamStorage.java
+++ b/java/src/org/broadinstitute/sting/gatk/io/storage/OutputStreamStorage.java
@@ -80,7 +80,7 @@ public class OutputStreamStorage extends OutputStream implements Storage<OutputS
      * @{inheritDoc}
      */
     public void flush() throws IOException {
-        outputStream.close();
+        outputStream.flush();
     }
 
     /**