diff --git a/java/src/org/broadinstitute/sting/playground/gatk/walkers/ReadErrorRateWalker.java b/java/src/org/broadinstitute/sting/playground/gatk/walkers/ReadErrorRateWalker.java index f4e149fc6..f854714a6 100755 --- a/java/src/org/broadinstitute/sting/playground/gatk/walkers/ReadErrorRateWalker.java +++ b/java/src/org/broadinstitute/sting/playground/gatk/walkers/ReadErrorRateWalker.java @@ -141,7 +141,7 @@ public class ReadErrorRateWalker extends ReadWalker { public void onTraversalDone(int[] sum) { for (int cycle = 0; cycle < sum.length - 1; cycle++) { double errorrate = ((double) sum[cycle])/((double) sum[sum.length - 1]); - System.out.println("[ERROR_RATE] " + cycle + " " + errorrate); + out.println("[ERROR_RATE] " + cycle + " " + errorrate); } } }