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Send things to the out file via the logger. 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@339 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
kiran 2009-04-08 21:49:03 +00:00
parent 6db9a00a0b
commit 089bf30cf4
1 changed files with 1 additions and 1 deletions
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2
java/src/org/broadinstitute/sting/playground/gatk/walkers/ReadErrorRateWalker.java
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@ -141,7 +141,7 @@ public class ReadErrorRateWalker extends ReadWalker<boolean[], int[]> {
public void onTraversalDone(int[] sum) {
for (int cycle = 0; cycle < sum.length - 1; cycle++) {
double errorrate = ((double) sum[cycle])/((double) sum[sum.length - 1]);
System.out.println("[ERROR_RATE] " + cycle + " " + errorrate);
out.println("[ERROR_RATE] " + cycle + " " + errorrate);
}
}
}