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More minor fixes to docs

This commit is contained in:
Eric Banks 2011-10-31 21:49:27 -04:00
parent 74b018a1f3
commit 0839c75c8d
1 changed files with 2 additions and 2 deletions
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4
public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/VariantsToTable.java
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@ -66,7 +66,7 @@ import java.util.*;
* *
* <h2>Output</h2> * <h2>Output</h2>
* <p> * <p>
* A table delimited file containing the values of the requested fields in the VCF file * A tab-delimited file containing the values of the requested fields in the VCF file
* </p> * </p>
* *
* <h2>Examples</h2> * <h2>Examples</h2>
@ -106,7 +106,7 @@ public class VariantsToTable extends RodWalker<Integer, Integer> {
/** /**
* By default this tool only emits values for fields where the FILTER field is either PASS or . (unfiltered). * By default this tool only emits values for fields where the FILTER field is either PASS or . (unfiltered).
* Throwing this flag will cause $WalkerName to emit values regardless of the FILTER field value. * Throwing this flag will cause VariantsToTable to emit values regardless of the FILTER field value.
*/ */
@Advanced @Advanced
@Argument(fullName="showFiltered", shortName="raw", doc="If provided, field values from filtered records will be included in the output", required=false) @Argument(fullName="showFiltered", shortName="raw", doc="If provided, field values from filtered records will be included in the output", required=false)