diff --git a/java/src/org/broadinstitute/sting/utils/genotype/vcf/VCFUtils.java b/java/src/org/broadinstitute/sting/utils/genotype/vcf/VCFUtils.java index 6e7963f23..eb1be3c03 100755 --- a/java/src/org/broadinstitute/sting/utils/genotype/vcf/VCFUtils.java +++ b/java/src/org/broadinstitute/sting/utils/genotype/vcf/VCFUtils.java @@ -49,7 +49,7 @@ public class VCFUtils { for ( ReferenceOrderedDataSource source : toolkit.getRodDataSources() ) { RMDTrack rod = source.getReferenceOrderedData(); - if ( rod.getType().equals(VCFRecord.class) ) { + if ( rod.getType().equals(VCFCodec.class) ) { vcfs.add(rod); } }